Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859755.1_cds_XP_016514447.1_26895
CDS Infomation

[gene=LOC107831218] [db_xref=GeneID:107831218] [protein=4-coumarate--CoA ligase 2-like] [protein_id=XP_016514447.1] [location=complement(join(6666..6785,6889..6994,7093..7160,7679..7824,8008..8206,10289..11359))] [gbkey=CDS]
Sequence

ATGTTGAGTGTAGCTAGTGTTGAAGCCCAGAAAGCAGAGTTATCTTCTTCTGTAATTCCT
CCTTCTGATCAATCTACTGAAGAGATACACGTGTTTAGATCAAGATTACCAGATATACAA
ATTTCCAACAATGTTCCTCTTCATGTTTACTTGTTTGAGAGGCTCTCTGAATTTCAAGAT
AGGACATGTCTTATAGCAGGCAGCAGTGGACAATCCTACACTTTTGCTGAAACTCATCTC
ATTTGCCAGAAAATAGCTGCTGGCTTAACAAATATAGGAATCAAAAAGGGAGATGTAATC
ATGACTTTTCTCCAGAACTGCGCGGAATTTGTGTTTACTTTTCTCTCGGCTTCTATGATT
GGCGCCGTTATAACTACAGCTAATCCATTTTACACAAAAGCAGAGGCGTTTAAGCAATTA
AAAGCGTCGAATGCAAAACTAATCGTTACTCAATCTCAGTACGTGGATAAATTTCGTGAT
TCTGGAGAGAATGACCCGAAAATTGGCGAAGATTTTTCAGTCATTACAATTGATGACCCC
CCTGAAAATTGCTTACATTTCTCTGTACTTTCTGAAGCTAACGAAGAGGAAATGCCAAAG
GGAATTGTAATCCAACCAGATGATCCAGTAGCTTTACCATTTTCTTCAGGAACAACAGGG
CTACCAAAAGGTGTGATTTTAACTCACAAAAGTTTAATCACAGGAGTAGCTCAATTAGTC
GACGGAGATAATCCAAATTTGTACTTAAAACAAGACGACGTGGTGCTATGTGTGCTACCT
TTGTTTCACATATTTGCGTTAAATTCAGTGCTTTTAGTCTCGTTAAGAGCAGGAGCTAGT
GTTTTACTAATGCAAAAATTCGAAATTGGTGCATTGCTGGAGCTGATACAAAACCACCGC
GTGTCAGTTGCAGCAGTAGTTCCGCCCTTGGTTCTTGCGTTGGCGAAAAATCCGATGGTT
GATTCGTTCGATTTGAGTTCGATTAGGCTCGTGTTGTCCGGGGCGGCGCCGCTGGGGAAA
GAGTTGGAGGAAGCGCTACATCAAAGAGTCCCGCAAGCTATATTTGGTCAGGGGTATGGT
ATGACAGAGGCAGGACCAGTAGTAACAATGTGCCCAGCATTTGCAAAGCAACCATTTTCA
ACCAAATCTGGCTCATGTGGTTCAGTAGTTCGAAATGCAGACCTCAAGGTGGTCGACCCC
GAAACTGGTGGCTCCCTCGGCCGCAACCAACCCGGCGAAATTTGCATCCGTGGTTCCCAA
ATCATGAAAGGTTATCTGAATGATGATGAGGCCACGGCACGGACCATAGATGTCGATGGA
TGGCTCCACACTGGTGATATAGGATACGTAGATGACGATGATGAAATATACATCGTCGAT
AGAGTCAAAGAGCTTATCAAGTTCAAAGGATTCCAGGTGCCACCAGCTGAGCTTGAGTCC
CTTCTAGTAAGCCATCCAGATATTGCAGATGCTGCTGTTGTACCGCAAAAAGATGATGCG
GCAGGGGAAGTCCCAGTTGCATTTGTGGTCCGCTCCGCCAATGGTTTTGAAATTACTGAA
GAAGCTATAAAGGAATTTATTGCCAAACAGGTGATATTCTATAAAAGATTGCACAAGGTG
TATTTTATTCACGCTATTCCAAAGTCTCCGTCTGGAAAGATACTGAGGAAAGAACTGAGA
GCCAAACTAGCTGCGCCCTCCACCCAGTGA

Peptide Sequence

PEP ID

XP_016514447.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase 2-like [Nicotiana tabacum]
Sequence

MLSVASVEAQKAELSSSVIPPSDQSTEEIHVFRSRLPDIQISNNVPLHVYLFERLSEFQD
RTCLIAGSSGQSYTFAETHLICQKIAAGLTNIGIKKGDVIMTFLQNCAEFVFTFLSASMI
GAVITTANPFYTKAEAFKQLKASNAKLIVTQSQYVDKFRDSGENDPKIGEDFSVITIDDP
PENCLHFSVLSEANEEEMPKGIVIQPDDPVALPFSSGTTGLPKGVILTHKSLITGVAQLV
DGDNPNLYLKQDDVVLCVLPLFHIFALNSVLLVSLRAGASVLLMQKFEIGALLELIQNHR
VSVAAVVPPLVLALAKNPMVDSFDLSSIRLVLSGAAPLGKELEEALHQRVPQAIFGQGYG
MTEAGPVVTMCPAFAKQPFSTKSGSCGSVVRNADLKVVDPETGGSLGRNQPGEICIRGSQ
IMKGYLNDDEATARTIDVDGWLHTGDIGYVDDDDEIYIVDRVKELIKFKGFQVPPAELES
LLVSHPDIADAAVVPQKDDAAGEVPVAFVVRSANGFEITEEAIKEFIAKQVIFYKRLHKV
YFIHAIPKSPSGKILRKELRAKLAAPSTQ

Transcript Sequence

Gene sequence data has not been registered.